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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ATAC-seq
2
FAIRE-seq
Assay category
165
DNA binding
40
DNA accessibility
25
DNA methylation
9
Transcription
6
3D chromatin structure
Date released
180
June, 2019
100
May, 2020
99
May, 2022
82
August, 2021
58
February, 2023
41
February, 2021
34
May, 2021
27
October, 2019
26
November, 2019
16
January, 2021
14
September, 2018
11
August, 2017
11
May, 2023
10
April, 2020
10
November, 2018
8
October, 2017
7
August, 2020
6
July, 2019
5
September, 2017
4
March, 2019
3
January, 2018
3
September, 2020
2
March, 2020
2
November, 2020
1
August, 2022
Available data
19
bam
18
bed narrowPeak
11
bigWig
2
bigBed narrowPeak
Organism
40
Homo sapiens
Biosample type
16
cell line
13
primary cell
6
tissue
5
in vitro differentiated cells
Organ
16
epithelium
16
pancreas
4
heart
2
blood vessel
2
brain
vasculature
1
artery
1
kidney
Project
40
AMP
Genome assembly (visualization)
23
hg19
17
GRCh38
Lab
35
AMP-T2D consortium
5
Kyle Gaulton, UCSD
Audit category:
16
inconsistent ontology term
organ_slims!
vasculature
files.file_type!
tsv
BIOSAMPLE
ASSAY
40 results
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ATAC-seq
FAIRE-seq
cell line
EndoC_BH1
16
primary cell
monocyte
13
tissue
heart left ventricle
2
frontal cortex
1
kidney
1
posterior cingulate cortex
1
right atrium auricular region
1
in vitro differentiated cells
embryonic stem cell
5
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