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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
RRBS
10
WGBS
6
Hi-C
4
ATAC-seq
2
FAIRE-seq
Assay category
22
DNA methylation
6
3D chromatin structure
6
DNA accessibility
Date released
400
November, 2017
322
August, 2017
233
October, 2019
205
May, 2021
200
May, 2022
193
August, 2021
186
June, 2019
149
February, 2023
148
May, 2020
90
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
67
May, 2019
59
September, 2020
58
February, 2021
47
September, 2018
47
September, 2023
40
May, 2024
35
December, 2018
34
July, 2019
25
January, 2019
24
February, 2018
23
October, 2017
20
November, 2019
19
April, 2020
16
January, 2021
15
May, 2023
11
March, 2020
11
September, 2017
8
January, 2018
7
August, 2020
6
November, 2020
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
75
bigWig
73
bam
tsv
19
bed bedMethyl
19
bigBed bedMethyl
5
bed narrowPeak
2
bed bed3+
2
bigBed narrowPeak
2
hdf5
Organism
34
Homo sapiens
Biosample type
26
tissue
8
primary cell
Organ
13
heart
7
brain
7
epithelium
vasculature
6
blood vessel
6
musculature of body
5
limb
4
kidney
3
liver
2
pancreas
1
artery
1
connective tissue
1
eye
1
pericardium
Project
34
AMP
Genome assembly (visualization)
19
hg19
11
GRCh38
Lab
34
AMP-T2D consortium
Audit category:
inconsistent ontology term
organ_slims!
vasculature
files.file_type!
tsv
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
34 results
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Clear Filters
RRBS
WGBS
Hi-C
ATAC-seq
FAIRE-seq
tissue
heart left ventricle
1
4
2
gastrocnemius medialis
4
heart right ventricle
2
kidney
1
1
brain
1
+ See 10 more…
primary cell
astrocyte of the cerebellum
1
brain pericyte
1
cardiac muscle cell
1
hepatocyte
1
kidney epithelial cell
1
+ See 3 more…
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