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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
ATAC-seq
4
Hi-C
Assay category
5
DNA accessibility
4
3D chromatin structure
Date released
5
February, 2023
2
March, 2020
2
October, 2019
Available data
291
bam
259
bigWig
141
fastq
132
bed narrowPeak
131
tsv
40
tagAlign
25
bed bed3+
17
bigBed narrowPeak
7
bed bedgraph
7
bedpe bed3+
5
bed bed3
4
hic
3
txt
2
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
9
Homo sapiens
Biosample type
15
tissue
9
in vitro differentiated cells
5
primary cell
3
cell line
Organ
5
connective tissue
Project
9
AMP
Genome assembly (visualization)
9
hg19
Lab
9
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
organ_slims!
vasculature
BIOSAMPLE
ASSAY
9 results
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ATAC-seq
Hi-C
in vitro differentiated cells
chondrocyte
5
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
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