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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
493
total RNA-seq
6
WGBS
5
single cell RNA-seq
3
snDrop-seq
Assay category
498
Transcription
6
DNA methylation
Date released
507
February, 2021
189
May, 2020
173
May, 2021
164
July, 2018
117
August, 2021
89
August, 2017
60
July, 2019
49
April, 2018
43
March, 2020
26
September, 2018
22
February, 2020
20
November, 2019
16
February, 2023
16
October, 2019
15
February, 2018
9
December, 2019
5
January, 2019
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
Available data
507
tsv
506
bam
495
bigWig
89
txt
45
fastq
11
bed narrowPeak
6
csv
4
bed bedgraph
2
bed bed3
2
bed bed3+
2
tagAlign
Organism
507
Homo sapiens
Biosample type
452
tissue
26
cell line
22
in vitro differentiated cells
7
primary cell
Organ
449
connective tissue
386
adipose tissue
58
bone element
52
artery
52
blood vessel
52
heart
vasculature
32
epithelium
32
pancreas
8
kidney
Project
501
AMP
6
HPAP
Genome assembly (visualization)
493
GRCh38
493
hg19
Lab
501
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
44
inconsistent ontology term
5
audit script error
organ_slims!
vasculature
BIOSAMPLE
ASSAY
507 results
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total RNA-seq
WGBS
single cell RNA-seq
snDrop-seq
tissue
adipose tissue
381
bone tissue
58
kidney
5
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
+ See 3 more…
cell line
EndoC_BH1
26
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
primary cell
pancreatic alpha cell
6
osteoblast
1
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