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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ATAC-seq
1
ChIP-seq
1
whole genome sequencing assay
Assay category
64
DNA accessibility
1
DNA binding
1
DNA sequencing
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
65
August, 2021
1
October, 2019
Available data
3207
bam
3014
bigWig
1684
bed narrowPeak
1532
tsv
1352
fastq
959
bigBed narrowPeak
392
tagAlign
305
bed broadPeak
268
bigBed broadPeak
260
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
21
bedpe bed3+
20
hic
12
bed bed3
8
csv
7
bed bedgraph
3
cool
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
66
Homo sapiens
Biosample type
65
tissue
1
cell line
Organ
64
kidney
1
brain
1
liver
Project
66
AMP
Genome assembly (visualization)
65
GRCh38
1
hg19
Lab
64
Katalin Susztak, Upenn
1
AMP-T2D consortium
1
Bing Ren, UCSD
organ_slims!
vasculature
BIOSAMPLE
ASSAY
66 results
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ATAC-seq
ChIP-seq
whole genome sequencing assay
tissue
kidney
64
medial globus pallidus
1
cell line
HepG2
1
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