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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1158
total RNA-seq
205
single cell RNA-seq
30
pCHi-C
18
small RNA-seq
14
ATAC-seq
6
WGBS
3
snDrop-seq
2
RNA microarray
Assay category
14
DNA accessibility
Date released
12
February, 2023
2
March, 2020
Available data
214
bed narrowPeak
146
bam
128
bigWig
64
xls
43
fastq
39
zippedFastqFolder
27
bigBed narrowPeak
14
tsv
12
bed bed3
7
bed bedgraph
4
bed bed3+
3
txt
2
bed broadPeak
Organism
14
Homo sapiens
Biosample type
12
primary cell
1
cell line
1
tissue
Organ
2
pancreas
1
epithelium
Project
14
AMP
Genome assembly (visualization)
2
hg19
Lab
14
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
organ_slims!
vasculature
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
14 results
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ATAC-seq
primary cell
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
oligodendrocyte
3
cell line
EndoC_BH1
1
tissue
islet of Langerhans
1
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