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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ChIP-seq
34
DNase-seq
7
ATAC-seq
6
total RNA-seq
Assay category
43
DNA binding
41
DNA accessibility
6
Transcription
Target of assay
31
histone
31
histone modification
20
broad histone mark
12
control
11
narrow histone mark
Date released
43
October, 2019
32
June, 2019
7
May, 2019
6
February, 2021
July, 2019
2
February, 2020
Available data
87
bam
71
bed narrowPeak
69
bigWig
64
bigBed narrowPeak
34
bed bed3+
34
bed broadPeak
34
bigBed broadPeak
6
tsv
Organism
90
Homo sapiens
Biosample type
90
tissue
Organ
889
pancreas
781
liver
665
connective tissue
511
epithelium
479
adipose tissue
368
heart
343
kidney
268
brain
vasculature
219
blood vessel
158
bone element
138
artery
117
limb
86
musculature of body
61
blood
61
bodily fluid
60
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
90
AMP
Genome assembly (visualization)
75
hg19
74
GRCh38
Lab
90
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
vasculature
lab.title!
Kyle Gaulton, UCSD
month_released!
July, 2019
BIOSAMPLE
ASSAY
90 results
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ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
tissue
tibial nerve
35
2
1
5
muscle of leg
7
13
muscle of arm
17
distal epiphysis of femur
1
distal epiphysis of humerus
1
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