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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
pCHi-C
Date released
2
March, 2020
Available data
3119
bam
2923
bigWig
1632
bed narrowPeak
1531
tsv
1263
fastq
944
bigBed narrowPeak
388
tagAlign
303
bed broadPeak
268
bigBed broadPeak
244
bed bed3+
158
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
21
bedpe bed3+
20
hic
12
bed bed3
8
csv
4
bed bedgraph
3
cool
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
Project
2
AMP
Genome assembly (visualization)
2
hg19
Lab
2
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
vasculature
ovary
lab.title!
Struan F.A. Grant, CHOP
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
2 results
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pCHi-C
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
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