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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
180
DNase-seq
31
ChIP-seq
5
total RNA-seq
3
single cell RNA-seq
2
RNA microarray
Assay category
180
DNA accessibility
31
DNA binding
8
Transcription
Target of assay
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
649
February, 2021
411
August, 2017
400
November, 2017
399
May, 2021
341
May, 2020
August, 2021
267
October, 2019
211
June, 2019
200
May, 2022
170
February, 2023
168
July, 2018
96
July, 2019
94
December, 2017
88
November, 2018
April, 2019
76
October, 2018
73
September, 2018
70
May, 2019
61
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
216
bam
208
bigWig
203
bed narrowPeak
203
bigBed narrowPeak
180
bed bed3+
180
bed broadPeak
180
bigBed broadPeak
9
tsv
Organism
221
Homo sapiens
Biosample type
163
tissue
56
primary cell
2
in vitro differentiated cells
Organ
84
kidney
43
musculature of body
35
heart
32
limb
30
brain
26
epithelium
18
connective tissue
18
ureter
7
eye
7
liver
vasculature
5
blood vessel
4
pancreas
2
artery
1
adipose tissue
Project
221
AMP
Genome assembly (visualization)
208
GRCh38
186
hg19
Lab
221
AMP-T2D consortium
Audit category:
27
inconsistent ontology term
4
audit script error
organ_slims!
vasculature
month_released!
April, 2019
August, 2021
BIOSAMPLE
ASSAY
221 results
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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
single cell RNA-seq
RNA microarray
tissue
heart
18
muscle of arm
17
kidney
13
1
muscle of leg
13
brain
12
+ See 34 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
hepatocyte
1
5
cardiac muscle cell
1
3
+ See 13 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
See all biosamples
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