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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
WGBS
20
RRBS
Assay category
1669
Transcription
1564
DNA binding
740
DNA accessibility
93
DNA methylation
29
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
24
July, 2019
15
August, 2017
7
November, 2018
6
February, 2021
May, 2021
Available data
41
zippedFastqFolder
34
bed bedMethyl
34
bigBed bedMethyl
21
fastq
16
bam
16
bigWig
6
tsv
Organism
93
Homo sapiens
Biosample type
56
primary cell
36
tissue
1
cell line
Organ
53
epithelium
53
pancreas
10
heart
7
connective tissue
7
liver
6
adipose tissue
6
musculature of body
4
kidney
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
47
HPAP
46
AMP
Genome assembly (visualization)
18
hg19
16
GRCh38
Lab
47
Klaus Kaestner, Upenn
46
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
vasculature
month_released!
May, 2021
BIOSAMPLE
ASSAY
93 results
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WGBS
RRBS
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
+ See 6 more…
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
pancreas
2
1
+ See 12 more…
cell line
HepG2
1
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