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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
WGBS
20
RRBS
Assay category
494
Transcription
387
DNA accessibility
219
DNA binding
77
DNA methylation
29
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
17
July, 2019
13
August, 2017
6
February, 2021
May, 2021
Available data
41
zippedFastqFolder
34
bed bedMethyl
34
bigBed bedMethyl
21
fastq
bam
16
bigWig
6
tsv
Organism
77
Homo sapiens
Biosample type
56
primary cell
21
tissue
Organ
53
epithelium
49
pancreas
6
liver
5
connective tissue
5
musculature of body
4
adipose tissue
4
heart
4
kidney
2
brain
1
eye
1
pericardium
vasculature
Project
47
HPAP
30
AMP
Genome assembly (visualization)
18
hg19
Lab
47
Klaus Kaestner, Upenn
30
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
vasculature
month_released!
May, 2021
files.file_type!
bam
BIOSAMPLE
ASSAY
77 results
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WGBS
RRBS
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
+ See 6 more…
tissue
liver
3
1
skeletal muscle tissue
4
heart left ventricle
2
1
subcutaneous abdominal adipose tissue
3
adipose tissue
1
+ See 6 more…
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