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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
295
ChIP-seq
Assay category
295
DNA binding
Target of assay
239
histone
239
histone modification
141
narrow histone mark
98
broad histone mark
52
control
4
transcription factor
Date released
87
May, 2021
November, 2017
69
August, 2017
50
May, 2020
49
October, 2019
24
August, 2021
14
October, 2017
2
February, 2021
Available data
2132
bam
2063
bigWig
1161
bed narrowPeak
1115
tsv
563
fastq
560
bigBed narrowPeak
295
tagAlign
231
bed bed3+
218
bed broadPeak
201
bigBed broadPeak
155
txt
73
zippedFastqFolder
64
xls
28
bed bedMethyl
28
bigBed bedMethyl
14
bedpe bed3+
13
hic
12
bed bed3
8
csv
7
bed bedgraph
2
hdf5
2
ibed
1
tagAlign bed3+
1
vcf
Organism
295
Homo sapiens
Biosample type
156
tissue
100
primary cell
37
in vitro differentiated cells
2
cell line
Organ
74
liver
52
brain
22
connective tissue
pancreas
15
musculature of body
8
adipose tissue
7
epithelium
6
artery
6
blood vessel
6
heart
vasculature
1
pituitary gland
Project
211
AMP
84
T1D
Genome assembly (visualization)
202
hg19
180
GRCh38
Lab
211
AMP-T2D consortium
84
Kyle Gaulton, UCSD
Audit category:
3
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
1
inconsistent assembly
organ_slims!
vasculature
pancreas
month_released!
November, 2017
BIOSAMPLE
ASSAY
295 results
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Clear Filters
ChIP-seq
tissue
liver
70
skeletal muscle tissue
15
brain
14
subcutaneous abdominal adipose tissue
8
angular gyrus
2
+ See 38 more…
primary cell
monocyte
84
skeletal muscle myoblast
12
hepatocyte
4
in vitro differentiated cells
neural progenitor cell
20
adipocyte
14
cardiomyocytes
3
cell line
iPSC derived cell line
2
See all biosamples
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