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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
RRBS
16
WGBS
Assay category
34
DNA methylation
Date released
21
July, 2019
7
November, 2018
6
August, 2017
Available data
3003
bam
2803
bigWig
1516
tsv
1489
bed narrowPeak
1352
fastq
922
bigBed narrowPeak
343
tagAlign
302
bed broadPeak
265
bigBed broadPeak
256
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
18
bedpe bed3+
17
hic
12
bed bed3
8
csv
7
bed bedgraph
3
cool
3
tar
2
hdf5
2
ibed
1
bedpe
1
vcf
Organism
34
Homo sapiens
Biosample type
24
tissue
9
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
34
AMP
Genome assembly (visualization)
18
hg19
16
GRCh38
Lab
34
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
vasculature
month_released!
October, 2019
BIOSAMPLE
ASSAY
34 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
kidney epithelial cell
1
+ See 4 more…
cell line
HepG2
1
See all biosamples
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