Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ChIP-seq
22
DNase-seq
Assay category
56
DNA binding
22
DNA accessibility
Target of assay
52
histone
52
histone modification
36
broad histone mark
16
narrow histone mark
4
transcription factor
3
recombinant protein
1
RNA binding protein
Date released
54
November, 2017
22
June, 2019
2
November, 2018
Available data
368
bam
350
fastq
188
tsv
183
bed narrowPeak
158
tagAlign
157
txt
153
zippedFastqFolder
151
bigWig
78
bigBed narrowPeak
64
xls
23
bed broadPeak
22
bed bed3+
22
bigBed broadPeak
16
bed bedMethyl
16
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
hic
1
vcf
Organism
78
Homo sapiens
Biosample type
68
tissue
6
primary cell
4
cell line
Organ
62
brain
7
kidney
6
epithelium
4
liver
3
heart
2
pancreas
1
blood vessel
1
connective tissue
vasculature
Project
78
AMP
Genome assembly (visualization)
916
GRCh38
hg19
Lab
78
AMP-T2D consortium
organ_slims!
vasculature
artery
assembly!
hg19
BIOSAMPLE
ASSAY
78 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
tissue
layer of hippocampus
16
caudate nucleus
11
1
substantia nigra
10
middle frontal area 46
9
cingulate gyrus
5
+ See 14 more…
primary cell
glomerular visceral epithelial cell
2
kidney tubule cell
2
cardiac fibroblast
1
kidney glomerular epithelial cell
1
cell line
HepG2
4
See all biosamples
Download