Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1623
ChIP-seq
1342
total RNA-seq
382
ATAC-seq
287
single cell RNA-seq
187
DNase-seq
86
RNA microarray
84
snATAC-seq
56
pCHi-C
26
WGBS
25
Hi-C
18
small RNA-seq
15
RRBS
5
GRO-seq
5
STARR-seq
4
FAIRE-seq
4
MeRIP-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
26
DNA methylation
Date released
10
July, 2019
9
August, 2017
7
November, 2018
Available data
16
bam
16
bed bedMethyl
16
bigBed bedMethyl
16
bigWig
11
fastq
Organism
26
Homo sapiens
Biosample type
25
tissue
1
cell line
Organ
51
pancreas
epithelium
8
heart
6
adipose tissue
6
connective tissue
5
liver
2
blood vessel
2
spleen
vasculature
1
limb
1
musculature of body
Project
26
AMP
Genome assembly (visualization)
16
GRCh38
Lab
26
AMP-T2D consortium
organ_slims!
vasculature
epithelium
BIOSAMPLE
ASSAY
26 results
search-icon
table-tab-icon
Clear Filters
WGBS
tissue
heart left ventricle
4
adipose tissue
3
liver
3
subcutaneous abdominal adipose tissue
3
body of pancreas
2
+ See 7 more…
cell line
HepG2
1
See all biosamples
Download