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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
ChIP-seq
Assay category
98
DNA binding
Target of assay
184
histone
184
histone modification
98
broad histone mark
86
narrow histone mark
59
control
19
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
44
August, 2017
19
October, 2018
17
September, 2018
6
November, 2019
4
June, 2019
4
May, 2019
4
October, 2019
Available data
89
bigWig
84
bed narrowPeak
78
bam
52
fastq
38
bigBed narrowPeak
16
bed broadPeak
16
tagAlign
6
bed bed3+
Organism
94
Homo sapiens
Biosample type
57
tissue
31
primary cell
10
cell line
Organ
78
pancreas
70
brain
57
heart
45
blood vessel
vasculature
44
connective tissue
44
epithelium
42
liver
34
limb
20
adipose tissue
20
musculature of body
16
nerve
15
kidney
14
artery
9
vein
4
embryo
4
spleen
Project
98
AMP
Genome assembly (visualization)
89
hg19
77
GRCh38
Lab
98
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
Audit category:
22
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
organ_slims!
vasculature
BIOSAMPLE
ASSAY
98 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
14
skeletal muscle tissue
12
body of pancreas
11
endocrine pancreas
8
pancreas
8
+ See 1 more…
primary cell
pancreatic endocrine cell
11
pancreatic ductal cell
6
pancreatic acinar cell
4
skeletal muscle satellite cell
4
pancreatic alpha cell
3
+ See 1 more…
cell line
EndoC_BH1
6
Panc1
4
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