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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
total RNA-seq
88
ChIP-seq
7
ATAC-seq
Assay category
98
Transcription
88
DNA binding
7
DNA accessibility
Target of assay
88
histone
88
histone modification
44
broad histone mark
44
narrow histone mark
Date released
136
May, 2021
45
May, 2020
7
August, 2020
5
March, 2020
September, 2020
Available data
193
bigWig
186
bam
134
zippedFastqFolder
128
fastq
104
tsv
88
bed narrowPeak
84
tagAlign
4
hic
3
bedpe bed3+
3
cool
Organism
193
Homo sapiens
Biosample type
187
primary cell
4
cell line
2
tissue
Organ
13
pancreas
11
epithelium
Project
AMP
186
T1D
7
HPAP
Genome assembly (visualization)
193
GRCh38
186
hg19
Lab
180
Kyle Gaulton, UCSD
7
Klaus Kaestner, Upenn
6
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
organ_slims!
vein
award.project!
AMP
month_released!
September, 2020
BIOSAMPLE
ASSAY
193 results
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total RNA-seq
ChIP-seq
ATAC-seq
primary cell
monocyte
53
84
pancreatic alpha cell
5
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
+ See 22 more…
cell line
EndoC_BH1
2
2
tissue
islet of Langerhans
2
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