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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
Hi-C
3
pCHi-C
Assay category
16
3D chromatin structure
Date released
11
March, 2020
3
October, 2019
2
August, 2021
2
November, 2019
1
August, 2018
Available data
3372
bam
3104
bigWig
1764
bed narrowPeak
1594
tsv
1189
fastq
1029
bigBed narrowPeak
398
tagAlign
318
bed broadPeak
281
bigBed broadPeak
271
bed bed3+
161
txt
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
19
bedpe bed3+
18
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
19
Homo sapiens
Biosample type
10
tissue
7
in vitro differentiated cells
2
cell line
Organ
4
pancreas
3
heart
2
blood vessel
2
epithelium
2
liver
2
musculature of body
2
vasculature
1
adipose tissue
1
connective tissue
vein
Project
19
AMP
HPAP
Genome assembly (visualization)
17
hg19
Lab
17
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
7
inconsistent ontology term
organ_slims!
vein
award.project!
HPAP
BIOSAMPLE
ASSAY
19 results
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Clear Filters
Hi-C
pCHi-C
tissue
islet of Langerhans
2
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
+ See 3 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
1
lymphocyte of B lineage (iPSC)
1
1
cardiac precursors (cardiac muscle cell)
1
white fat cell
1
cell line
EndoC_BH1
1
HepG2
1
See all biosamples
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