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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
Assay category
7
DNA accessibility
Date released
4
February, 2021
3
February, 2023
Available data
2790
bam
2632
bigWig
1481
tsv
1400
bed narrowPeak
931
fastq
674
bigBed narrowPeak
378
tagAlign
268
bed bed3+
259
bed broadPeak
222
bigBed broadPeak
160
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
20
bedpe bed3+
19
hic
11
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
7
Homo sapiens
Biosample type
7
in vitro differentiated cells
Organ
4
connective tissue
Project
7
AMP
Genome assembly (visualization)
7
hg19
Lab
4
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
organ_slims!
vein
biosample_type!
cell line
organ_slims!!
vein
BIOSAMPLE
ASSAY
7 results
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ATAC-seq
in vitro differentiated cells
adipocyte
4
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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