Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ATAC-seq
28
ChIP-seq
5
total RNA-seq
4
DNase-seq
2
single cell RNA-seq
1
RRBS
Assay category
41
DNA accessibility
28
DNA binding
7
Transcription
1
DNA methylation
Target of assay
20
histone
20
histone modification
14
broad histone mark
7
control
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
35
February, 2023
26
October, 2019
5
July, 2019
5
May, 2019
2
August, 2021
2
February, 2020
2
June, 2019
Available data
62
bed narrowPeak
37
bam
30
bigWig
25
bigBed narrowPeak
7
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
77
Homo sapiens
Biosample type
74
tissue
cell line
3
primary cell
Organ
854
pancreas
684
connective tissue
491
adipose tissue
445
epithelium
390
liver
335
kidney
327
heart
286
brain
170
vasculature
164
blood vessel
159
bone element
122
limb
96
musculature of body
75
artery
61
eye
43
nerve
29
embryo
25
spleen
vein
20
lung
18
ureter
16
skeleton
8
blood
8
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
77
AMP
Genome assembly (visualization)
65
GRCh38
31
hg19
Lab
77
AMP-T2D consortium
organ_slims!
vein
biosample_type!
cell line
BIOSAMPLE
ASSAY
77 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
DNase-seq
single cell RNA-seq
RRBS
tissue
coronary artery
36
5
1
2
tibial artery
1
23
1
2
pulmonary artery
2
pericardium
1
primary cell
endothelial cell of coronary artery
1
pericardium fibroblast
1
smooth muscle cell of the coronary artery
1
Download