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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
single cell RNA-seq
6
ATAC-seq
Assay category
8
Transcription
6
DNA accessibility
Date released
7
February, 2021
5
February, 2023
1
November, 2018
1
September, 2018
Available data
2779
bam
2584
bigWig
1729
bed narrowPeak
1257
fastq
1122
tsv
1001
bigBed narrowPeak
376
tagAlign
308
bed broadPeak
272
bigBed broadPeak
244
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
21
bedpe bed3+
21
hic
8
csv
6
bed bed3
4
hdf5
3
bed bedgraph
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
14
Homo sapiens
Biosample type
11
tissue
2
primary cell
1
cell line
Organ
connective tissue
5
kidney
4
bone element
4
skeleton
2
liver
1
brain
Project
14
AMP
Genome assembly (visualization)
6
hg19
1
GRCh38
Lab
14
AMP-T2D consortium
Audit category:
5
audit script error
1
inconsistent replicate
organ_slims!
vein
connective tissue
BIOSAMPLE
ASSAY
14 results
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single cell RNA-seq
ATAC-seq
tissue
kidney
5
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
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primary cell
pancreatic cell
2
cell line
HepG2
1
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