Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
3
single cell RNA-seq
Assay category
12
DNA accessibility
3
Transcription
Date released
10
February, 2023
3
February, 2021
1
November, 2018
1
September, 2018
Available data
3228
bam
3023
bigWig
1621
bed narrowPeak
1576
tsv
1358
fastq
925
bigBed narrowPeak
398
tagAlign
240
bed broadPeak
203
bigBed broadPeak
193
bed bed3+
153
zippedFastqFolder
99
txt
32
bed bedMethyl
32
bigBed bedMethyl
22
bedpe bed3+
20
hic
12
bed bed3
7
bed bedgraph
5
hdf5
3
cool
3
csv
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
15
Homo sapiens
Biosample type
6
tissue
5
in vitro differentiated cells
3
primary cell
1
cell line
Organ
6
connective tissue
kidney
4
bone element
4
skeleton
2
liver
1
brain
Project
15
AMP
Genome assembly (visualization)
12
hg19
2
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
1
inconsistent replicate
organ_slims!
vein
kidney
BIOSAMPLE
ASSAY
15 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
single cell RNA-seq
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
liver
1
+ See 1 more…
in vitro differentiated cells
chondrocyte
5
primary cell
pancreatic cell
2
osteoblast
1
cell line
HepG2
1
See all biosamples
Download