Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
4
ATAC-seq
2
DNase-seq
2
WGBS
Assay category
7
DNA binding
6
DNA accessibility
2
DNA methylation
Target of assay
5
RNA binding protein
5
transcription factor
2
histone
2
histone modification
2
narrow histone mark
Date released
5
August, 2017
5
October, 2018
1
February, 2023
1
June, 2019
1
November, 2018
1
November, 2019
1
October, 2017
Available data
442
bam
425
bigWig
401
tsv
44
fastq
13
bed narrowPeak
10
bigBed narrowPeak
8
tagAlign
6
bed bed3+
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
Organism
15
Homo sapiens
Biosample type
15
tissue
Organ
444
liver
220
pancreas
205
brain
199
heart
187
kidney
157
epithelium
135
vasculature
130
blood vessel
93
limb
78
connective tissue
74
artery
64
musculature of body
54
blood
54
bodily fluid
34
eye
27
nerve
18
ureter
16
spleen
15
adipose tissue
14
embryo
vein
8
bone element
8
skeleton
1
pericardium
1
pituitary gland
Project
15
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
15
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
vein
BIOSAMPLE
ASSAY
15 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
WGBS
tissue
omental fat pad
3
1
2
adipose tissue
1
1
2
subcutaneous adipose tissue
2
1
adipose tissue(adipose white tissue)
1
subcutaneous abdominal adipose tissue
1
Download