Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
Hi-C
Assay category
14
3D chromatin structure
Date released
9
March, 2020
3
October, 2019
2
November, 2019
Available data
3167
bam
2844
bigWig
1530
bed narrowPeak
1488
tsv
1163
fastq
1029
bigBed narrowPeak
316
bed broadPeak
314
tagAlign
281
bigBed broadPeak
267
bed bed3+
95
txt
36
bed bedMethyl
36
bigBed bedMethyl
17
bedpe bed3+
14
hic
12
bed bed3
8
csv
5
hdf5
4
bed bedgraph
3
tar
2
ibed
1
tagAlign bed3+
Organism
14
Homo sapiens
Biosample type
9
tissue
4
in vitro differentiated cells
1
cell line
Organ
3
blood vessel
3
epithelium
3
heart
3
pancreas
3
vasculature
2
musculature of body
vein
1
liver
Project
14
AMP
Genome assembly (visualization)
14
hg19
Lab
14
AMP-T2D consortium
3
Klaus Kaestner, Upenn
2
Bing Ren, UCSD
1
ITG
1
Katalin Susztak, Upenn
Audit category:
5
inconsistent ontology term
organ_slims!
vein
BIOSAMPLE
ASSAY
14 results
search-icon
table-tab-icon
Clear Filters
Hi-C
tissue
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
heart right ventricle
1
+ See 3 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
cell line
EndoC_BH1
1
See all biosamples
Download