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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
DNase-seq
3
ChIP-seq
1
ATAC-seq
Assay category
6
DNA accessibility
3
DNA binding
Target of assay
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Date released
187
June, 2019
70
November, 2017
41
August, 2017
9
November, 2018
5
October, 2019
4
October, 2017
1
March, 2019
1
November, 2020
Available data
245
bam
206
bigWig
188
bed narrowPeak
63
bigBed narrowPeak
63
tagAlign
17
fastq
16
tsv
9
bed broadPeak
6
bed bed3+
5
bigBed broadPeak
3
bedpe bed3+
3
hic
1
hdf5
1
tagAlign bed3+
Organism
9
Homo sapiens
Biosample type
8
tissue
1
cell line
Organ
6
blood vessel
6
vasculature
4
epithelium
4
limb
vein
3
brain
2
artery
2
nerve
2
pancreas
Project
9
AMP
Genome assembly (visualization)
9
GRCh38
9
hg19
Lab
8
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
2
missing controlled_by
organ_slims!
vein
BIOSAMPLE
ASSAY
9 results
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DNase-seq
ChIP-seq
ATAC-seq
tissue
brain
3
tibial artery
2
tibial nerve
2
islet of Langerhans
1
cell line
Panc1
1
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