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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
23
ChIP-seq
16
total RNA-seq
Assay category
56
Transcription
23
DNA binding
Target of assay
23
control
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
101
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
43
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
120
bam
bigWig
97
bed narrowPeak
97
bigBed narrowPeak
41
fastq
19
zippedFastqFolder
Organism
79
Homo sapiens
Biosample type
57
primary cell
22
tissue
Organ
17
epithelium
17
pancreas
11
blood vessel
11
vasculature
6
heart
3
brain
2
artery
1
kidney
1
limb
1
musculature of body
Project
56
HPAP
23
AMP
Lab
56
Klaus Kaestner, Upenn
23
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
vein
files.file_type!
bigWig
BIOSAMPLE
ASSAY
79 results
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single cell RNA-seq
ChIP-seq
total RNA-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
kidney epithelial cell
1
pancreatic beta cell
1
tissue
thoracic aorta
4
ascending aorta
3
right atrium auricular region
3
aorta
2
coronary artery
2
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