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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
7
total RNA-seq
4
Hi-C
1
WGBS
Assay category
DNA accessibility
32
DNA binding
7
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
49
histone
49
histone modification
broad histone mark
17
control
15
narrow histone mark
Date released
33
October, 2019
5
July, 2019
3
February, 2020
3
May, 2019
Available data
36
bam
19
bigWig
14
bed narrowPeak
14
bigBed narrowPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
44
Homo sapiens
Biosample type
44
tissue
Organ
720
liver
695
pancreas
606
connective tissue
463
adipose tissue
357
epithelium
259
heart
179
brain
176
kidney
147
bone element
133
vasculature
129
blood vessel
78
artery
60
blood
60
bodily fluid
44
limb
41
musculature of body
33
embryo
29
eye
24
nerve
19
spleen
10
lung
vein
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
44
AMP
Genome assembly (visualization)
18
GRCh38
18
hg19
Lab
44
AMP-T2D consortium
organ_slims!
vein
assay_slims!
DNA accessibility
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
44 results
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ChIP-seq
total RNA-seq
Hi-C
WGBS
tissue
tibial nerve
19
5
tibial artery
9
1
gastrocnemius medialis
1
4
muscle of leg
3
1
islet of Langerhans
1
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