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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
78
ChIP-seq
Assay category
78
DNA binding
Target of assay
78
histone
78
histone modification
43
narrow histone mark
35
broad histone mark
28
control
9
transcription factor
8
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
21
September, 2018
14
August, 2017
14
December, 2017
10
November, 2019
6
October, 2019
3
August, 2021
3
May, 2019
2
June, 2019
2
May, 2021
2
November, 2017
1
March, 2020
Available data
78
bam
78
bed narrowPeak
78
bigWig
51
fastq
19
bigBed narrowPeak
4
tagAlign
3
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
78
Homo sapiens
Biosample type
51
primary cell
15
in vitro differentiated cells
12
cell line
Organ
187
brain
151
pancreas
103
liver
97
heart
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
76
AMP
2
T1D
Genome assembly (visualization)
78
GRCh38
78
hg19
Lab
78
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
5
inconsistent control read length
organ_slims!
vein
BIOSAMPLE
ASSAY
78 results
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Clear Filters
ChIP-seq
primary cell
pancreatic ductal cell
13
pancreatic acinar cell
8
epithelial cell of proximal tubule
7
pancreatic alpha cell
7
pancreatic beta cell
7
+ See 5 more…
in vitro differentiated cells
hepatocyte
12
Hepatic endoderm
2
pancreatic PP cell
1
cell line
EndoC_BH1
12
See all biosamples
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