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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
398
total RNA-seq
ChIP-seq
6
ATAC-seq
6
WGBS
3
small RNA-seq
2
DNase-seq
pCHi-C
1
RNA microarray
Assay category
401
Transcription
8
DNA accessibility
6
DNA methylation
Date released
386
February, 2021
12
July, 2019
7
August, 2017
2
February, 2020
1
August, 2021
1
February, 2023
1
January, 2018
1
June, 2019
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
1
October, 2019
Available data
406
bigWig
405
bam
400
tsv
6
bed narrowPeak
6
fastq
4
bigBed narrowPeak
2
bed bed3+
2
bed bedMethyl
2
bed broadPeak
2
bigBed bedMethyl
2
bigBed broadPeak
Organism
415
Homo sapiens
Biosample type
414
tissue
2
primary cell
Organ
727
pancreas
526
connective tissue
416
adipose tissue
395
epithelium
300
kidney
256
heart
236
liver
158
bone element
133
vasculature
130
blood vessel
107
artery
66
brain
56
limb
56
musculature of body
52
eye
19
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
vein
4
spleen
2
pericardium
1
pituitary gland
1
skin of body
1
spinal cord
Project
416
AMP
Genome assembly (visualization)
407
hg19
406
GRCh38
Lab
416
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
pCHi-C
ChIP-seq
BIOSAMPLE
ASSAY
416 results
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total RNA-seq
ATAC-seq
WGBS
small RNA-seq
DNase-seq
RNA microarray
tissue
adipose tissue
382
3
3
subcutaneous adipose tissue
7
1
1
1
omental fat pad
5
1
1
2
subcutaneous abdominal adipose tissue
3
visceral abdominal adipose tissue
3
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primary cell
mesenchymal stem cell of adipose
1
1
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