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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
2
pCHi-C
2
total RNA-seq
1
RNA microarray
Assay category
54
DNA binding
DNA methylation
2
Transcription
Target of assay
30
histone
30
histone modification
24
control
20
broad histone mark
10
narrow histone mark
Date released
36
August, 2017
18
October, 2018
2
February, 2020
1
August, 2018
1
August, 2021
1
March, 2020
Available data
20
fastq
19
bam
7
tagAlign
3
tsv
1
bedpe bed3+
Organism
58
Homo sapiens
Biosample type
58
tissue
1
in vitro differentiated cells
Organ
237
pancreas
225
kidney
166
epithelium
161
liver
157
heart
122
brain
89
bone element
89
connective tissue
69
blood vessel
69
vasculature
59
adipose tissue
48
artery
27
eye
25
limb
20
lung
20
musculature of body
14
blood
14
bodily fluid
12
nerve
9
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
59
AMP
Genome assembly (visualization)
hg19
422
GRCh38
Lab
59
AMP-T2D consortium
assembly!
hg19
assay_slims!
DNA methylation
BIOSAMPLE
ASSAY
59 results
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Clear Filters
ChIP-seq
pCHi-C
total RNA-seq
RNA microarray
tissue
subcutaneous abdominal adipose tissue
35
subcutaneous adipose tissue
10
1
1
omental fat pad
8
1
adipose tissue
1
1
in vitro differentiated cells
white fat cell
1
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