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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
4
WGBS
2
pCHi-C
2
total RNA-seq
1
RNA microarray
Assay category
35
DNA binding
4
DNA methylation
2
Transcription
Target of assay
30
histone
30
histone modification
20
broad histone mark
10
narrow histone mark
5
control
Date released
39
August, 2017
2
February, 2020
1
August, 2018
1
August, 2021
1
March, 2020
Available data
23
fastq
bam
7
tagAlign
3
tsv
2
bed bedMethyl
2
bigBed bedMethyl
2
bigWig
1
bedpe bed3+
Organism
43
Homo sapiens
Biosample type
43
tissue
1
in vitro differentiated cells
Organ
234
pancreas
205
kidney
179
epithelium
136
heart
89
bone element
70
liver
65
connective tissue
45
blood vessel
45
vasculature
44
adipose tissue
39
artery
34
brain
26
eye
20
lung
19
musculature of body
8
blood
8
bodily fluid
8
limb
5
gonad
5
ovary
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
44
AMP
Genome assembly (visualization)
hg19
1
GRCh38
Lab
44
AMP-T2D consortium
assembly!
hg19
files.file_type!
bam
BIOSAMPLE
ASSAY
44 results
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Clear Filters
ChIP-seq
WGBS
pCHi-C
total RNA-seq
RNA microarray
tissue
subcutaneous abdominal adipose tissue
35
3
adipose tissue
1
1
subcutaneous adipose tissue
1
1
omental fat pad
1
in vitro differentiated cells
white fat cell
1
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