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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
6
WGBS
3
total RNA-seq
2
pCHi-C
1
RNA microarray
Assay category
65
DNA binding
6
DNA methylation
3
Transcription
Target of assay
35
control
30
histone
30
histone modification
20
broad histone mark
10
narrow histone mark
Date released
42
August, 2017
18
October, 2018
11
October, 2019
3
February, 2020
1
August, 2018
1
August, 2021
1
March, 2020
Available data
32
bam
23
fastq
7
tagAlign
4
tsv
2
bed bedMethyl
2
bigBed bedMethyl
2
bigWig
1
bedpe bed3+
Organism
76
Homo sapiens
Biosample type
76
tissue
1
in vitro differentiated cells
Organ
288
pancreas
225
kidney
213
epithelium
166
liver
165
heart
122
brain
95
connective tissue
89
bone element
71
blood vessel
71
vasculature
65
adipose tissue
48
artery
27
eye
26
limb
23
musculature of body
20
lung
14
blood
14
bodily fluid
12
nerve
11
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
77
AMP
Genome assembly (visualization)
hg19
455
GRCh38
Lab
77
AMP-T2D consortium
assembly!
hg19
BIOSAMPLE
ASSAY
77 results
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Clear Filters
ChIP-seq
WGBS
total RNA-seq
pCHi-C
RNA microarray
tissue
subcutaneous abdominal adipose tissue
35
3
subcutaneous adipose tissue
10
1
1
tibial nerve
11
1
omental fat pad
8
1
adipose tissue
1
3
1
in vitro differentiated cells
white fat cell
1
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