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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
4
WGBS
3
total RNA-seq
2
pCHi-C
1
ATAC-seq
1
RNA microarray
Assay category
54
DNA binding
4
DNA methylation
3
Transcription
1
DNA accessibility
Target of assay
30
histone
30
histone modification
24
control
20
broad histone mark
10
narrow histone mark
Date released
40
August, 2017
18
October, 2018
2
February, 2020
1
August, 2018
1
August, 2021
1
February, 2023
1
March, 2020
1
May, 2023
Available data
441
bam
bigWig
401
tsv
44
fastq
12
bed narrowPeak
10
bigBed narrowPeak
8
tagAlign
6
bed bed3+
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
Organism
64
Homo sapiens
Biosample type
64
tissue
1
in vitro differentiated cells
Organ
295
pancreas
215
kidney
189
epithelium
168
liver
167
heart
105
connective tissue
81
vasculature
80
blood vessel
65
adipose tissue
63
brain
56
artery
55
eye
31
limb
27
musculature of body
20
lung
17
bone element
16
skeleton
14
blood
14
bodily fluid
12
nerve
9
spleen
7
vein
6
embryo
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
Project
65
AMP
Genome assembly (visualization)
2
hg19
1
GRCh38
Lab
65
AMP-T2D consortium
Audit category:
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bigWig
BIOSAMPLE
ASSAY
65 results
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ChIP-seq
WGBS
total RNA-seq
pCHi-C
ATAC-seq
RNA microarray
tissue
subcutaneous abdominal adipose tissue
35
3
subcutaneous adipose tissue
10
1
1
omental fat pad
8
1
adipose tissue
1
1
1
1
1
in vitro differentiated cells
white fat cell
1
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