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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
3
ATAC-seq
2
DNase-seq
Assay category
6
DNA binding
5
DNA accessibility
Target of assay
5
RNA binding protein
5
transcription factor
1
histone
1
histone modification
1
narrow histone mark
Date released
5
October, 2018
2
August, 2017
1
June, 2019
1
November, 2018
1
November, 2019
1
October, 2017
Available data
411
bam
410
bigWig
398
tsv
11
bed narrowPeak
11
fastq
9
bigBed narrowPeak
2
bed bed3+
2
bed bedMethyl
2
bed broadPeak
2
bigBed bedMethyl
2
bigBed broadPeak
Organism
11
Homo sapiens
Biosample type
11
tissue
Organ
362
liver
198
brain
190
heart
182
kidney
155
pancreas
132
vasculature
128
blood vessel
117
epithelium
91
limb
74
artery
71
connective tissue
54
blood
54
bodily fluid
46
musculature of body
27
nerve
18
ureter
14
embryo
14
spleen
12
vein
11
adipose tissue
8
bone element
8
skeleton
6
eye
1
pituitary gland
Project
11
AMP
Genome assembly (visualization)
13
hg19
11
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
ATAC-seq
DNase-seq
tissue
omental fat pad
3
1
2
subcutaneous adipose tissue
2
1
adipose tissue
1
adipose tissue(adipose white tissue)
1
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