Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
6
WGBS
2
pCHi-C
2
total RNA-seq
1
RNA microarray
Assay category
47
DNA binding
6
DNA methylation
2
Transcription
Target of assay
24
histone
24
histone modification
23
control
16
broad histone mark
8
narrow histone mark
Date released
35
August, 2017
18
October, 2018
2
February, 2020
1
August, 2018
1
August, 2021
1
March, 2020
Available data
23
fastq
21
bam
tagAlign
3
tsv
2
bed bedMethyl
2
bigBed bedMethyl
2
bigWig
1
bedpe bed3+
Organism
57
Homo sapiens
Biosample type
57
tissue
1
in vitro differentiated cells
Organ
283
pancreas
225
kidney
211
epithelium
163
heart
122
liver
89
bone element
74
connective tissue
69
blood vessel
69
vasculature
58
adipose tissue
47
brain
46
artery
27
eye
26
limb
21
musculature of body
20
lung
14
blood
14
bodily fluid
12
nerve
11
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
58
AMP
Genome assembly (visualization)
hg19
424
GRCh38
Lab
58
AMP-T2D consortium
files.file_type!
tagAlign
assembly!
hg19
BIOSAMPLE
ASSAY
58 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
pCHi-C
total RNA-seq
RNA microarray
tissue
subcutaneous abdominal adipose tissue
28
3
subcutaneous adipose tissue
10
1
1
omental fat pad
8
1
adipose tissue
1
3
1
in vitro differentiated cells
white fat cell
1
Download