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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
DNase-seq
4
ChIP-seq
2
Hi-C
Assay category
11
DNA accessibility
4
DNA binding
2
3D chromatin structure
Target of assay
4
transcription factor
Date released
6
June, 2019
4
August, 2017
4
October, 2019
2
July, 2019
1
November, 2018
Available data
622
bam
575
bigWig
469
tsv
142
bed narrowPeak
89
bigBed narrowPeak
47
fastq
17
bed bed3+
16
bed broadPeak
15
bigBed broadPeak
14
tagAlign
3
bed bedMethyl
3
bedpe bed3+
3
bigBed bedMethyl
3
hic
2
hdf5
1
tar
Organism
17
Homo sapiens
Biosample type
11
tissue
6
primary cell
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
17
AMP
Genome assembly (visualization)
16
hg19
15
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
4
missing controlled_by
BIOSAMPLE
ASSAY
17 results
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DNase-seq
ChIP-seq
Hi-C
tissue
white adipose tissue
4
coronary artery
2
omental fat pad
2
tibial artery
2
ascending aorta
1
primary cell
brain microvascular endothelial cell
1
1
endothelial cell of umbilical vein
2
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
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