Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
4
ATAC-seq
2
DNase-seq
Assay category
11
DNA binding
6
DNA accessibility
Target of assay
9
transcription factor
5
RNA binding protein
2
histone
2
histone modification
2
narrow histone mark
Date released
7
August, 2017
5
October, 2018
1
February, 2023
1
June, 2019
1
November, 2018
1
November, 2019
1
October, 2017
Available data
442
bam
425
bigWig
401
tsv
44
fastq
13
bed narrowPeak
10
bigBed narrowPeak
8
tagAlign
6
bed bed3+
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
Organism
17
Homo sapiens
Biosample type
17
tissue
Organ
444
liver
226
pancreas
206
brain
183
kidney
153
epithelium
151
heart
135
vasculature
131
blood vessel
92
limb
88
connective tissue
74
artery
61
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
17
adipose tissue
15
embryo
14
spleen
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
17
AMP
Genome assembly (visualization)
17
hg19
15
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
4
missing controlled_by
BIOSAMPLE
ASSAY
17 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
tissue
omental fat pad
3
1
2
white adipose tissue
4
subcutaneous adipose tissue
2
1
adipose tissue
1
1
adipose tissue(adipose white tissue)
1
+ See 1 more…
See all biosamples
Download