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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
397
total RNA-seq
8
ChIP-seq
3
small RNA-seq
1
pCHi-C
Assay category
400
Transcription
8
DNA binding
Target of assay
7
histone
7
histone modification
4
broad histone mark
3
narrow histone mark
1
control
Date released
386
February, 2021
12
July, 2019
8
August, 2017
2
February, 2020
1
March, 2020
Available data
442
bam
425
bigWig
401
tsv
44
fastq
13
bed narrowPeak
10
bigBed narrowPeak
8
tagAlign
6
bed bed3+
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
Organism
409
Homo sapiens
Biosample type
407
tissue
2
primary cell
Organ
500
connective tissue
436
pancreas
409
adipose tissue
260
liver
174
heart
163
epithelium
144
brain
74
blood vessel
74
vasculature
64
artery
58
bone element
24
kidney
24
musculature of body
14
embryo
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
409
AMP
Genome assembly (visualization)
399
hg19
398
GRCh38
Lab
409
AMP-T2D consortium
BIOSAMPLE
ASSAY
409 results
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total RNA-seq
ChIP-seq
small RNA-seq
pCHi-C
tissue
adipose tissue
381
1
subcutaneous abdominal adipose tissue
8
subcutaneous adipose tissue
7
1
omental fat pad
5
1
visceral abdominal adipose tissue
3
primary cell
mesenchymal stem cell of adipose
1
1
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