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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
397
total RNA-seq
3
small RNA-seq
2
DNase-seq
1
pCHi-C
Assay category
400
Transcription
2
DNA accessibility
DNA binding
Date released
386
February, 2021
12
July, 2019
2
February, 2020
1
June, 2019
1
March, 2020
1
November, 2018
Available data
406
bigWig
405
bam
401
tsv
7
fastq
6
bed narrowPeak
4
bigBed narrowPeak
2
bed bed3+
2
bed bedMethyl
2
bed broadPeak
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
Organism
403
Homo sapiens
Biosample type
401
tissue
2
primary cell
Organ
487
connective tissue
426
pancreas
403
adipose tissue
198
heart
179
liver
172
epithelium
102
kidney
79
vasculature
77
blood vessel
62
artery
58
bone element
58
brain
43
limb
musculature of body
18
ureter
14
embryo
9
eye
7
nerve
2
intestine
2
spleen
2
vein
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
403
AMP
Genome assembly (visualization)
400
GRCh38
400
hg19
Lab
403
AMP-T2D consortium
organ_slims!
musculature of body
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
403 results
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total RNA-seq
small RNA-seq
DNase-seq
pCHi-C
tissue
adipose tissue
381
1
omental fat pad
5
1
2
subcutaneous adipose tissue
7
1
visceral abdominal adipose tissue
3
primary cell
mesenchymal stem cell of adipose
1
1
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