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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
458
total RNA-seq
6
single cell RNA-seq
3
small RNA-seq
2
pCHi-C
Assay category
467
Transcription
Date released
438
February, 2021
17
July, 2019
6
August, 2021
5
February, 2020
3
March, 2020
Available data
622
bam
575
bigWig
469
tsv
142
bed narrowPeak
89
bigBed narrowPeak
47
fastq
17
bed bed3+
16
bed broadPeak
15
bigBed broadPeak
14
tagAlign
3
bed bedMethyl
3
bedpe bed3+
3
bigBed bedMethyl
3
hic
2
hdf5
1
tar
Organism
469
Homo sapiens
Biosample type
413
tissue
52
cell line
4
primary cell
Organ
478
connective tissue
417
pancreas
401
adipose tissue
174
liver
168
heart
156
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
26
brain
24
kidney
14
embryo
9
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
469
AMP
Genome assembly (visualization)
456
GRCh38
456
hg19
Lab
469
AMP-T2D consortium
BIOSAMPLE
ASSAY
469 results
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total RNA-seq
single cell RNA-seq
small RNA-seq
pCHi-C
tissue
adipose tissue
381
1
subcutaneous adipose tissue
7
1
aorta
1
4
1
omental fat pad
5
1
visceral abdominal adipose tissue
3
+ See 5 more…
cell line
smooth muscle cell of the coronary artery
52
primary cell
mesenchymal stem cell of adipose
1
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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