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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
386
total RNA-seq
50
ChIP-seq
6
WGBS
1
ATAC-seq
Assay category
386
Transcription
50
DNA binding
6
DNA methylation
1
DNA accessibility
Target of assay
32
histone
32
histone modification
20
broad histone mark
12
narrow histone mark
12
transcription factor
6
control
Date released
386
February, 2021
57
August, 2017
23
October, 2018
12
July, 2019
2
February, 2020
1
August, 2018
1
August, 2021
1
February, 2023
1
January, 2018
1
June, 2019
1
March, 2020
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
1
October, 2019
Available data
403
bam
403
bigWig
386
tsv
18
fastq
8
tagAlign
4
bed bed3+
3
bed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed narrowPeak
1
bed broadPeak
Organism
443
Homo sapiens
Biosample type
443
tissue
Organ
580
connective tissue
443
adipose tissue
220
pancreas
150
bone element
66
artery
66
blood vessel
66
heart
66
vasculature
61
epithelium
57
liver
26
musculature of body
8
kidney
8
skeleton
6
limb
Project
443
AMP
Genome assembly (visualization)
402
GRCh38
401
hg19
Lab
443
AMP-T2D consortium
Audit category:
12
missing controlled_by
BIOSAMPLE
ASSAY
443 results
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total RNA-seq
ChIP-seq
WGBS
ATAC-seq
tissue
adipose tissue
381
2
3
subcutaneous abdominal adipose tissue
36
3
white adipose tissue
12
subcutaneous adipose tissue
2
1
visceral abdominal adipose tissue
3
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