Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
6
WGBS
2
total RNA-seq
1
RNA microarray
1
pCHi-C
Assay category
54
DNA binding
6
DNA methylation
2
Transcription
Target of assay
30
histone
30
histone modification
24
control
20
broad histone mark
10
narrow histone mark
Date released
42
August, 2017
18
October, 2018
2
February, 2020
1
August, 2018
1
August, 2021
March, 2020
Available data
23
fastq
21
bam
7
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
2
bigWig
2
tsv
1
bedpe bed3+
Organism
63
Homo sapiens
Biosample type
63
tissue
1
in vitro differentiated cells
Organ
285
pancreas
223
kidney
213
epithelium
202
heart
165
liver
120
brain
93
connective tissue
89
bone element
70
blood vessel
70
vasculature
64
adipose tissue
48
artery
27
eye
26
limb
22
musculature of body
19
lung
14
blood
14
bodily fluid
12
nerve
10
spleen
8
embryo
5
vein
4
gonad
4
ovary
4
skeleton
1
bone marrow
lymph node
1
pituitary gland
1
skin of body
1
spinal cord
1
thymus
Project
64
AMP
Genome assembly (visualization)
hg19
424
GRCh38
Lab
64
AMP-T2D consortium
organ_slims!
lymph node
assembly!
hg19
month_released!
March, 2020
BIOSAMPLE
ASSAY
64 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
total RNA-seq
RNA microarray
pCHi-C
tissue
subcutaneous abdominal adipose tissue
35
3
subcutaneous adipose tissue
10
1
1
omental fat pad
8
1
adipose tissue
1
3
in vitro differentiated cells
white fat cell
1
Download