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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
4
ATAC-seq
2
DNase-seq
2
WGBS
Assay category
19
DNA binding
6
DNA accessibility
2
DNA methylation
Target of assay
17
transcription factor
5
RNA binding protein
2
histone
2
histone modification
2
narrow histone mark
Date released
17
August, 2017
5
October, 2018
1
January, 2018
1
June, 2019
1
November, 2018
1
October, 2017
1
October, 2019
Available data
442
bam
425
bigWig
tsv
44
fastq
13
bed narrowPeak
10
bigBed narrowPeak
8
tagAlign
6
bed bed3+
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
Organism
27
Homo sapiens
Biosample type
27
tissue
Organ
460
liver
215
pancreas
210
brain
154
epithelium
154
heart
119
kidney
97
vasculature
96
connective tissue
92
blood vessel
87
limb
62
musculature of body
55
blood
55
bodily fluid
31
artery
27
adipose tissue
27
nerve
18
ureter
spleen
15
embryo
15
vein
6
eye
1
pituitary gland
Project
27
AMP
Genome assembly (visualization)
25
hg19
24
GRCh38
Lab
27
AMP-T2D consortium
Audit category:
12
missing controlled_by
organ_slims!
spleen
files.file_type!
tsv
BIOSAMPLE
ASSAY
27 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
WGBS
tissue
white adipose tissue
12
omental fat pad
3
1
2
adipose tissue
1
2
2
subcutaneous adipose tissue
2
1
subcutaneous abdominal adipose tissue
1
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