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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
4
ATAC-seq
2
DNase-seq
Assay category
61
DNA binding
6
DNA accessibility
Target of assay
56
transcription factor
15
RNA binding protein
10
chromatin remodeller
3
histone
3
histone modification
3
narrow histone mark
Date released
27
December, 2018
15
January, 2019
13
November, 2018
5
October, 2018
3
August, 2017
1
February, 2023
1
June, 2019
1
November, 2019
1
October, 2017
Available data
502
bam
480
bigWig
401
tsv
104
fastq
67
bed narrowPeak
64
bigBed narrowPeak
8
tagAlign
6
bed bed3+
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
Organism
67
Homo sapiens
Biosample type
54
cell line
13
tissue
Organ
441
liver
214
pancreas
203
brain
183
kidney
151
epithelium
151
heart
133
vasculature
129
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
67
AMP
Genome assembly (visualization)
67
hg19
65
GRCh38
Lab
67
AMP-T2D consortium
Audit category:
1
inconsistent control
1
inconsistent ontology term
BIOSAMPLE
ASSAY
67 results
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ChIP-seq
ATAC-seq
DNase-seq
cell line
GM12878
54
tissue
omental fat pad
3
1
2
subcutaneous adipose tissue
2
1
adipose tissue
1
1
adipose tissue(adipose white tissue)
1
subcutaneous abdominal adipose tissue
1
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