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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
4
ATAC-seq
4
DNase-seq
1
FAIRE-seq
Assay category
17
DNA binding
9
DNA accessibility
Target of assay
12
histone
12
histone modification
7
narrow histone mark
5
RNA binding protein
5
broad histone mark
5
transcription factor
Date released
13
October, 2019
5
October, 2018
3
August, 2017
1
February, 2023
1
June, 2019
1
November, 2018
1
November, 2019
1
October, 2017
Available data
462
bam
440
bigWig
401
tsv
44
fastq
26
bed narrowPeak
23
bigBed narrowPeak
8
bed bed3+
8
tagAlign
7
bed broadPeak
6
bigBed broadPeak
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hic
1
tar
Organism
26
Homo sapiens
Biosample type
13
primary cell
13
tissue
Organ
441
liver
214
pancreas
203
brain
183
kidney
151
epithelium
151
heart
133
vasculature
129
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
26
AMP
Genome assembly (visualization)
26
hg19
23
GRCh38
Lab
26
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
26 results
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ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
10
2
1
tissue
omental fat pad
3
1
2
subcutaneous adipose tissue
2
1
adipose tissue
1
1
adipose tissue(adipose white tissue)
1
subcutaneous abdominal adipose tissue
1
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