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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
398
total RNA-seq
61
ChIP-seq
6
ATAC-seq
6
WGBS
3
small RNA-seq
2
DNase-seq
2
pCHi-C
1
RNA microarray
Assay category
61
DNA binding
Target of assay
32
histone
32
histone modification
24
control
20
broad histone mark
17
transcription factor
narrow histone mark
5
RNA binding protein
Date released
38
August, 2017
23
October, 2018
Available data
36
bam
36
fastq
17
bigWig
5
bed narrowPeak
5
bigBed narrowPeak
5
tagAlign
4
bed bed3+
Organism
61
Homo sapiens
Biosample type
61
tissue
Organ
492
liver
145
pancreas
120
connective tissue
101
brain
80
epithelium
76
vasculature
74
blood vessel
69
heart
61
adipose tissue
59
blood
59
bodily fluid
51
limb
37
kidney
28
artery
27
nerve
26
musculature of body
18
spleen
14
embryo
11
vein
2
eye
Project
61
AMP
Genome assembly (visualization)
17
GRCh38
17
hg19
Lab
61
AMP-T2D consortium
Audit category:
12
missing controlled_by
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
61 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
25
subcutaneous adipose tissue
12
white adipose tissue
12
omental fat pad
11
adipose tissue
1
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