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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ChIP-seq
Assay category
63
DNA binding
Target of assay
355
transcription factor
135
histone modification
134
histone
132
control
82
recombinant protein
72
narrow histone mark
63
RNA binding protein
62
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
34
November, 2017
19
November, 2018
5
October, 2018
4
December, 2017
1
August, 2021
Available data
62
bam
62
fastq
61
bed narrowPeak
61
bigWig
60
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
1
tar
Organism
63
Homo sapiens
Biosample type
54
cell line
7
tissue
2
in vitro differentiated cells
Organ
58
liver
10
blood
10
bodily fluid
10
connective tissue
9
pancreas
8
epithelium
6
heart
5
adipose tissue
5
vasculature
4
blood vessel
3
brain
3
kidney
1
artery
1
eye
Project
63
AMP
Genome assembly (visualization)
60
hg19
56
GRCh38
Lab
62
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
2
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
BIOSAMPLE
ASSAY
63 results
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ChIP-seq
cell line
HepG2
54
tissue
omental fat pad
3
subcutaneous adipose tissue
2
liver
1
right lobe of liver
1
in vitro differentiated cells
hepatocyte
2
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