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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ChIP-seq
4
WGBS
3
ATAC-seq
2
pCHi-C
2
total RNA-seq
1
RNA microarray
Assay category
56
DNA binding
4
DNA methylation
3
DNA accessibility
2
Transcription
Target of assay
32
histone
32
histone modification
24
control
20
broad histone mark
12
narrow histone mark
Date released
41
August, 2017
18
October, 2018
2
February, 2020
2
March, 2020
2
October, 2019
1
August, 2021
1
February, 2023
1
January, 2018
Available data
20
fastq
19
bam
8
tagAlign
4
tsv
3
bigWig
2
bed narrowPeak
1
bed broadPeak
1
bigBed narrowPeak
Organism
67
Homo sapiens
Biosample type
68
tissue
43
in vitro differentiated cells
7
primary cell
1
stem cell
Organ
134
kidney
123
liver
122
heart
119
pancreas
92
bone element
67
connective tissue
66
adipose tissue
62
brain
53
eye
40
musculature of body
28
blood vessel
28
vasculature
26
limb
20
lung
15
epithelium
12
nerve
11
artery
9
spleen
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
68
AMP
Genome assembly (visualization)
482
hg19
GRCh38
Lab
68
AMP-T2D consortium
assembly!
GRCh38
BIOSAMPLE
ASSAY
68 results
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ChIP-seq
WGBS
ATAC-seq
pCHi-C
total RNA-seq
RNA microarray
tissue
subcutaneous abdominal adipose tissue
36
3
subcutaneous adipose tissue
10
1
1
omental fat pad
8
1
adipose tissue
1
1
3
1
adrenal gland
1
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