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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
10
ATAC-seq
4
DNase-seq
Assay category
Transcription
34
DNA binding
14
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
February, 2023
26
October, 2019
14
February, 2021
5
May, 2019
2
June, 2019
1
July, 2019
Available data
48
bam
39
bed narrowPeak
31
bigWig
25
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
48
Homo sapiens
Biosample type
34
tissue
14
cell line
Organ
598
liver
453
pancreas
310
epithelium
261
brain
229
kidney
193
connective tissue
152
heart
134
vasculature
128
blood vessel
115
limb
93
bone element
89
adipose tissue
87
musculature of body
69
blood
69
bodily fluid
48
artery
38
nerve
25
spleen
23
embryo
22
vein
18
ureter
15
eye
11
lung
8
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
48
AMP
Genome assembly (visualization)
39
GRCh38
39
hg19
Lab
48
AMP-T2D consortium
assay_slims!
Transcription
month_released!
February, 2023
BIOSAMPLE
ASSAY
48 results
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ChIP-seq
ATAC-seq
DNase-seq
tissue
tibial artery
23
1
2
coronary artery
5
1
2
cell line
smooth muscle cell of the coronary artery
6
8
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