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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
252
ChIP-seq
Assay category
252
DNA binding
86
DNA accessibility
82
Transcription
3
3D chromatin structure
2
DNA methylation
Target of assay
207
histone
207
histone modification
123
narrow histone mark
84
broad histone mark
37
control
8
transcription factor
4
RNA binding protein
Date released
107
October, 2019
91
November, 2017
33
May, 2019
15
October, 2017
6
February, 2021
Available data
230
bam
197
bigWig
195
bed narrowPeak
124
tagAlign
115
bigBed narrowPeak
18
fastq
15
bed broadPeak
6
bigBed broadPeak
1
tagAlign bed3+
Organism
252
Homo sapiens
Biosample type
237
tissue
9
primary cell
6
cell line
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
129
epithelium
102
vasculature
99
blood vessel
94
heart
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
252
AMP
Genome assembly (visualization)
196
GRCh38
148
hg19
Lab
252
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
BIOSAMPLE
ASSAY
252 results
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Clear Filters
ChIP-seq
tissue
layer of hippocampus
23
tibial artery
23
brain
20
substantia nigra
16
angular gyrus
15
+ See 65 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
cell line
smooth muscle cell of the coronary artery
6
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